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Batch-Invariant VLAs

Numerical divergence in SigLIP, Conv2D, PyTorch dispatch, and batched matrix multiplication.


Published
2026-09-04T09:00Z
Revised
2026-09-14
Read
6 min / 1,250 words
Topics
VLA / PyTorch / Triton / Inference
Authors
Cybernetic Physics

A line chart with no axes. A green trace, labelled batch = 1, runs almost flat from left to right. A white dashed trace, labelled batch = 32, leaves it just past the middle at a point marked with a small square — annotated first divergence — and falls steadily away from it to the right edge.
The same input at batch = 1 and batch = 32. The traces agree until one kernel picks a different reduction order, and never meet again.

Not many people are thinking about VLA inference servers yet but in the very near future they’ll be powering fleets of robots both in production and during RL training. Non-determinism in VLA inference is expected since it has already been shown to exist in LLM inference. However, the non-determinism in VLA inference is more insidious because it can be propagated through the action space and affect the robot’s behavior in the real world.

This post describes a debugging journey to make π0 batch-invariant, which is crucial for reliable robot behavior.

Profiling batch-invariance

Before changing any code, we added an opt-in tracer and began recording named tensors along the model path:

pythontrace.py
with trace_context(trace):    output = model(**inputs) GLOBAL_TRACE.record("final_action", action)

The tracer recursively detaches and clones tensors, including tensors nested in dictionaries and lists. It moves those snapshots to CPU, then compares the batch-one reference with element zero of the batched run. At each point it reports maximum absolute difference, mean absolute difference, RMSE, relative L2 error, and output magnitude.

trace.json
"input_embeds.selected_image_feature.hidden_states": {  "max_abs_diff": 0.0,  "mean_abs_diff": 0.0,  "rmse": 0.0,  "relative_l2_mean": 0.0,  "relative_l2_max": 0.0,  "output_abs_max": 4.864709377288818},"input_embeds.selected_image_feature.last_hidden_state": {  "max_abs_diff": 6.496906280517578e-06,  "mean_abs_diff": 1.1066537126680487e-06,  "rmse": 1.3891448134017992e-06,  "relative_l2_mean": 8.866771281645924e-07,  "relative_l2_max": 8.866771281645924e-07,  "output_abs_max": 7.3877058029174805},
Each one of these is a named tensor compared between the batched and non-batched runs.

The names preserve the route through the model. For example, the image path records names such as input_embeds.selected_image_feature.patch_embeds and joint-model states under step_0.action_joint_model.layer_{i}.pre_attn. This allows us to find the first diverging (non-zero diff) tensor.

The seven stages of the model path, top to bottom: input, SigLIP patch embedding, vision transformer, joint model / KV cache, action expert, flow integration, final action. Every stage after the input is marked exact. Nothing diverges.
Fig. 01The goal state: zero points of divergence along the entire path.

A perfect deterministic implementation must have zero points of divergence.

After a fix, the same experiment can be rerun. If the earlier tensors are now exact but a later tensor is not, the tracer has done its job. It has moved the investigation to the next actionable boundary.

Thinky's Ops were not enough

Before changing π0, we enabled the batch-invariant operator mode from Thinking Machines. Their work already provides CUDA implementations whose arithmetic is designed not to change when unrelated batch members are added. In this checkout the mode uses torch.library and registers:

  • aten::mm
  • aten::addmm
  • aten::_log_softmax
  • aten::mean.dim

The important entries for this story are aten::mm and aten::addmm. Their implementations call a persistent Triton matmul kernel, accumulate output tiles in float32, and use a fixed tile configuration selected by input dtype.

We reran the same batch experiment. Some differences disappeared, but the action was still not invariant. The tracer painted a picture like the following:

The seven stages of the model path, top to bottom: input, SigLIP patch embedding, vision transformer, joint model / KV cache, action expert, flow integration, final action. Every stage after the input is marked diverged, and the SigLIP patch embedding — the first of them — is annotated as the first divergence.
Fig. 02With only the batch-invariant operators enabled, everything downstream of the patch embedding still diverges.

All the named tensors diverged, but the first divergence was in the SigLIP patch embedding.

Yay! We were worried that Thinky’s batch-invariant operators were going to be enough and that the project would be easy.

Weird nn.Conv2d behavior

The tracer pointed to the very beginning of π0’s visual path, SigLIP’s patch embedding. This is the operation that turns an image into tokens. In the configured model, a 224×224 RGB image is split into non-overlapping 14×14 patches, producing (224 / 14)² = 256 image tokens. The original path used nn.Conv2d with 1,152 output channels, a 14×14 kernel, a 14×14 stride, and no padding.

Mathematically, each output patch is independent of every other sample:

y[b, p, o] = Σ x[b, c, hₚ + kₕ, wₚ + k𝓌] · W[o, c, kₕ, k𝓌]

(1)

However, the common implementations of any matmul (which includes convolution) uses a reduction over the input channels and kernel positions. The order of that reduction can change when the global shape changes, which can lead to non-deterministic behavior across batches.

After testing the nn.Conv2d kernel on its own, with the same configuration, we found out that it stops being batch-invariant at batch-size 32.

python
Conv2d(  in_channels=3,  out_channels=1152,  kernel_size=(14, 14),  stride=(14, 14), padding=(0, 0),  padding_mode='zeros', device='cuda')
stdout
batch_size =  1    max abs diff = 0.0batch_size =  2    max abs diff = 0.0batch_size =  4    max abs diff = 0.0batch_size =  8    max abs diff = 0.0batch_size = 16    max abs diff = 0.0batch_size = 32    max abs diff = 0.000902771949...
A “normal” convolution configuration (e.g. using a 3×3 kernel) is batch-invariant, but the SigLIP patch projection is not.

On paper, this should be an easy case. Every output patch depends only on one image, one patch, and one set of weights. But that mathematical independence does not force one fixed GPU reduction order. The convolution implementation can make choices based on the complete input shape.

Replacing nn.Conv2d

The active SigLIP model now uses _UnfoldConv2d. For each sample it calls F.unfold, flattens the learned kernel, computes a matrix product, adds the bias, and reshapes the result back to (1, channels, patch_height, patch_width) before concatenating samples. It is intentionally straightforward. We wanted the reduction scope to be visible before worrying about performance.

pythonsiglip/patch_embed.py
for sample in x:    patches = F.unfold(sample.unsqueeze(0), ...)    output = flattened_weight @ patches + bias[:, None]    outputs.append(output.reshape(1, -1, height, width))return torch.cat(outputs, dim=0)

What about a custom Triton implementation?

We also explored writing a specialized Triton implementation. It maps each program to an output element, decodes width, height, channel, and sample indices, then performs a fixed reduction over input channels and kernel positions. It masks out-of-range reduction elements and padded spatial loads, accumulates in a Triton accumulator, adds bias, and stores one output element.

The design process is out of scope for this investigation and will be explored in a future post.

torch.matmul(a,b) != torch.mm(a,b)

The new _UnfoldConv2d implementation successfully restored batch-invariance to the SigLIP patch projection. However, the tracer then pointed to a new divergence in the joint model, in the attention path.

The seven stages of the model path, top to bottom: input, SigLIP patch embedding, vision transformer, joint model / KV cache, action expert, flow integration, final action. The SigLIP patch embedding and the vision transformer are marked exact; the joint model / KV cache and everything after it are marked diverged, and the joint model / KV cache is annotated as the first divergence.
Fig. 03After the patch-projection fix, the first divergence moves into the joint model's attention path.

In this case there was no smell. All operators used the batch-invariant package (aten::mm, aten::addmm, aten::_log_softmax, and aten::mean.dim). So the error must be in the dispatch path.

Adding more internal logging steps for the tracer to check, it seems like the divergence begins at the final matrix multiplication of the joint model.

python
attn_output = torch.matmul(attn_weights, value_states) GLOBAL_TRACE.record(    f"step_0.action_joint_model.layer_{layer_idx}"    ".pre_attn.attn_output_pre",    attn_output,)

But wait. Shouldn’t Thinky’s batch-invariant aten::mm have been used here? The answer is no.

torch.matmul is shape-dependent, and it does not always dispatch to the same operator as torch.mm.

With two-dimensional inputs, torch.matmul reaches aten::mm. With higher-rank inputs, it treats the leading dimensions as batches and reaches aten::bmm. The Python call looks similar, but the profiler shows a different dispatch path:

torch.profiler
# attn_weights = torch.randn(4, 281, device='cuda')# value_states = torch.randn(281, 256, device='cuda') Name          Self CPU %  Self CPU  CPU tot %  CPU total   CPU avg  Self CUDA  CUDA %  CUDA total  CUDA avg  #------------  ----------  --------  ---------  ---------  --------  ---------  ------  ----------  --------  -aten::matmul       0.05%  21.280us     99.99%   46.617ms  46.617ms    0.000us   0.00%    31.353us  31.353us  1aten::mm          76.89%  35.848ms     99.94%   46.596ms  46.596ms    4.479us 100.00%    31.353us  31.353us  1 # attn_weights = torch.randn(32, 8, 4, 281, device='cuda')# value_states = torch.randn(32, 8, 281, 256, device='cuda') Name          Self CPU %  Self CPU  CPU tot %  CPU total   CPU avg  Self CUDA  CUDA %  CUDA total   CUDA avg  #------------  ----------  --------  ---------  ---------  --------  ---------  ------  ----------  ---------  -aten::matmul       0.14%  64.853us     99.99%   47.305ms  47.305ms    0.000us   0.00%   211.712us  211.712us  1aten::bmm         75.93%  35.922ms     99.69%   47.166ms  47.166ms   26.464us 100.00%   211.712us  211.712us  1
Input shapesExpressionProfiler eventWhat this means
(4, 281) × (281, 256)torch.matmul(a, b)aten::matmul → aten::mmThe invariant aten::mm replacement can run.
(32, 8, 4, 281) × (32, 8, 281, 256)torch.matmul(a, b)aten::matmul → aten::bmmThe aten::mm replacement is bypassed.
Dispatch depends on tensor rank, not on the Python spelling.

Replacing aten::bmm

Simple looped solution

A simple looped solution would be to treat the first two dimensions as independent batch-like indices and performs a genuine two-dimensional multiplication for every pair:

python
def loop_bmm(a, b):    return torch.stack([        torch.stack([            torch.mm(a[i][j], b[i][j])            for j in range(a.shape[1])        ])        for i in range(a.shape[0])    ])

Using vmap

Using vmap(torch.mm) sounds promising. Until you realise that vmap requires special registration using torch.library.register_vmap.

That basically means that vmap is not a magic solution that will automatically work for all functions. It needs to be explicitly implemented for our new aten::mm implementation. However, if we do torch.vmap(torch.mm)(a, b) anyway, it would simply dispatch the existing aten::bmm implementation, which is not what we want.

A custom batch-invariant aten::bmm implementation for vmap is explored in a future blog.

Using a custom Triton implementation

A custom Triton implementation for aten::bmm is also explored in a future blog.

Running the tracer after all our changes

results.json
{  "batch_size": 32,  "reference_samples": 1,  "distractor_samples": 31,  "num_trials": 1,  "reference_seconds": 1.2700269939377904,  "batch_seconds_mean": 23.618852018378675,  "throughput_speedup_vs_reference": 1.7206959836314306,  "metrics_mean": {    "max_abs_diff": 0.0,    "mean_abs_diff": 0.0,    "rmse": 0.0,    "relative_l2_mean": 0.0,    "relative_l2_max": 0.0,    "output_abs_max": 1.0  },  "metrics_worst": {    "max_abs_diff": 0.0,    "mean_abs_diff": 0.0,    "rmse": 0.0,    "relative_l2_max": 0.0,    "output_abs_max": 1.0  }}

Every single tracked metric, mean and worst case alike, reads exactly 0.0 across the entire batch. Determinism achieved!

Conclusion

The investigation started with Thinking Machines’ batch-invariant operators, but enabling them was only the first experiment. The tracer then gave us a sequence of concrete failures instead of one mysterious final-action mismatch. First the SigLIP patch projection failed, then the higher-rank attention product.

The patch-projection replacement made the first trace segment exact. Then the next mismatch appeared in higher-rank attention multiplication. The Python spelling torch.matmul did not imply the replaced aten::mm path, and vmap(torch.mm) was not a safe assumption either. The explicit stack of torch.mm calls was the simplest way to force the invariant implementation and test the dispatch diagnosis.

That left us with a correctness-first implementation and a clear performance debt. The remaining optimization is to replace the launch-heavy stack loop with a batch-invariant BMM kernel that preserves the same arithmetic contract. For us, this kind of systems work ends the same way every time. Find the first divergence, prove the dispatch path, restore the numerical contract, and only then make the path fast.

Numerical guarantees in PyTorch live below the Python API. If the guarantee depends on a specific arithmetic path, profiling and dispatch inspection are not optional.


Attribution

The batch-invariant operator approach is based on the work published by Thinking Machines. The model is derived from the open-pi-zero implementation and the π0 architecture described by Physical Intelligence. The implementation uses PyTorch and Triton. The π0-specific work here is the first-divergence tracing, the SigLIP patch-projection intervention, the dispatch investigation, the explicit BMM workaround, and the end-to-end experiment harness.